Bioinformatics Researcher
Driving bioinformatics research, innovating solutions, and developing pipelines that power genomic discovery.
About Me
I am a dedicated bioinformatics professional with a strong focus on clinical genomics, next-generation sequencing (NGS), and data-driven pipeline development. With hands-on experience in variant interpretation, NIPT, metagenomics, and fungal/bacterial WGS, I design automated workflows that enhance efficiency and accuracy in diagnostic and research settings.
I actively contribute to the development of reproducible pipelines and robust bioinformatics solutions. As a passionate educator, I also teach bioinformatics principles, making complex analyses accessible to learners and professionals alike. My goal is to bridge biology and computation through scalable, impactful solutions that advance precision medicine and real-world genomic discovery.
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Genomics Focus
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Research Driven
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Innovation Mindset
Skills & Expertise
Genomics & NGS
Data Analysis & Statistics
Programming & Tools
Clinical Bioinformatics
Services
Genomic Data Analysis
Comprehensive analysis of genomic datasets including variant calling, annotation, and interpretation of NGS data
- Whole Genome Sequencing (Bacteria) Data Analysis
- Whole Metagenome ShotGun Sequencing Data Analysis
- Whole Exome Sequencing Data Analysis
- 16s Metagenomics Data Analysis
RNA-seq Analysis
End-to-end RNA-Seq data analysis โ from raw reads to biological insights. Includes QC, alignment, DEG analysis, pathway enrichment, and visualizations.
- Differential gene expression analysis
- Functional Enrichment & Pathway Analysis
- Data Visualization
Sanger Sequencing Data Analysis
Comprehensive analysis of Sanger sequencing data for variant detection and sequence validation
- Mutation detection and validation
- Chromatogram analysis and interpretation
- Sanger, 16S rRNA, and 18S-ITS Sequencing Services
Custom Pipeline Development
Automated bioinformatics workflows and pipeline development
- Nextflow/Snakemake pipelines
- Docker containerization
- Cloud deployment solutions
Data Visualization
Interactive dashboards and publication-ready visualizations
- Publication graphics
- Interactive web dashboards
- Automated reports
Training & Consulting
Bioinformatics training and strategic consulting services
- Team training workshops
- Software tool selection
- Project planning & strategy
Coming Soon
Machine Learning Solutions
Custom ML models for biological data prediction and classification tasks
Research Interests
Genomics & Proteomics
Developing computational methods for analyzing large-scale genomic and proteomic datasets
Machine Learning in Biology
Applying AI/ML techniques to predict protein structure, function, and drug interactions
Systems Biology
Modeling complex biological networks and pathways using computational approaches
Publications
Integrative immunoinformatics and molecular simulation-based design of a multi-epitope vaccine against hepatitis C virus
In Silico Research in Biomedicine
DOI: 10.1016/j.insi.2025.100029
View PaperProjects
Read2Ring
A lightweight, cross-platform Bash pipeline that downloads SRA data, classifies with Kraken2, and visualizes taxonomic output with Krona.
DeepGenePredictor
DeepGenePredictor is a machine learning project aimed at predicting gene expression levels using a deep neural network. The project leverages PyTorch for building and training the model, and sklearn for data preprocessing and evaluation.
Genomic-Insights
Genomic Insights is an interactive Jupyter-based tool for exploring and analyzing genomic data. It enables visualization, annotation, and interpretation of genetic variants for research and diagnostics.
Decoding-SRR29492069-Comprehensive-Gene-Annotation-via-WGS
A comprehensive pipeline for gene annotation using Whole Genome Sequencing (WGS) data, from raw data retrieval to functional annotation with BLASTX and PANTHER. Designed for Linux systems, it supports de novo assembly and quality control using open-source tools.
Pricing
Consultation
- Initial project assessment
- Technical guidance
- Tool recommendations
- Strategy planning
- Video call support
Project-Based
- End-to-end bioinformatics project assistance for postgraduate and doctoral research
- Complete project delivery
- Custom pipeline development
- Data analysis & reporting
- 3 months support
Pipeline Development
- Custom bioinformatics pipelines
- Nextflow/Snakemake workflows
- Docker containerization
- 6 months support
Note: All projects include an initial consultation to determine scope and provide accurate quotes. Rush projects may incur additional charges.